GSM980694: 4 d0 M2 sRNA; Mus musculus; RNA-Seq - SRA

SRX173223: GSM980694: 4 d0 M2 sRNA; Mus musculus; RNA-Seq
1 ILLUMINA (Illumina HiSeq 2000) run: 198.1M spots, 9.9G bases, 6.4Gb downloads

Submitted by: Gene Expression Omnibus (GEO)

Study: Small RNAs in undifferentiated and differentiating mouse embryonic stem cells

PRJNA171949 • SRP014691 • All experiments • All runs

show Abstracthide Abstract

We report the identification of small RNAs in undifferentiated (d0) and differentiating (d4) mouse embryonic stem (ES) cells using high-throughput sequencing. The goal of this study was to identify small RNAs involved in X-chromosome inactivation (XCI). We have identified a subset of small RNAs that are generated from transposon sequences and map to the X-chromosome, suggesting their involvement in transposon control on the inactivating X-chromosome. Overall design: Examination of 5 small RNA and 4 RNA-seq libraries in 3 ES cell states.

Sample: 4 d0 M2 sRNA

SAMN01096992 • SRS353116 • All experiments • All runs

Organism: Mus musculus

Library:

Name: GSM980694: 4 d0 M2 sRNA

Instrument: Illumina HiSeq 2000

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: cDNA

Layout: SINGLE

Spot descriptor:

1 forward

Experiment attributes:

GEO Accession: GSM980694

Links:

External link: GEO Sample

NCBI link: NCBI Entrez (gds)

Runs: 1 run, 198.1M spots, 9.9G bases, 6.4Gb

Run	# of Spots	# of Bases	Size	Published
SRR531830	198,058,149	9.9G	6.4Gb	2018-03-22

ID:: 214883

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Recent activity